snipar package

Subpackages

• snipar.example package
  • Submodules
    • snipar.example.simulate_phenotype module
    • snipar.example.snipar_example_data module
  • Module contents
• snipar.imputation package
  • Submodules
    • snipar.imputation.impute_from_sibs module
      • Functions
    • snipar.imputation.impute_from_sibs module
      • Functions
    • snipar.imputation.preprocess_data module
      • Classes
      • Functions
  • Module contents
• snipar.read package
  • Submodules
    • snipar.read.bed module
    • snipar.read.bgen module
    • snipar.read.phenotype module
  • Module contents
• snipar.scripts package
  • Submodules
    • snipar.scripts.correlate module
    • snipar.scripts.gwas module
    • snipar.scripts.ibd module
    • snipar.scripts.impute module
    • snipar.scripts.pgs module
    • snipar.scripts.simulate module
  • Module contents
• snipar.tests package
  • Submodules
    • snipar.tests.test_example module
    • snipar.tests.test_imputation module
    • snipar.tests.test_impute module
    • snipar.tests.test_impute_from_sibs module
    • snipar.tests.test_impute_from_sibs module
    • snipar.tests.test_manhattan module
    • snipar.tests.test_pedigree_creation module
    • snipar.tests.test_sibreg module
    • snipar.tests.utils module
  • Module contents

Submodules

• snipar.config module
• snipar.correlate module
• snipar.errors module
• snipar.gtarray module
• snipar.gwas module
• snipar.ibd module
• snipar.ld module
• snipar.lmm module
• snipar.map module
• snipar.pedigree module
• snipar.pgs module
• snipar.preprocess module
• snipar.simulate module
• snipar.utilities module

Module contents